Li Ji, a cold and arrogant genius student in the Department of Architecture, was kidnapped by a creature from another world, Dark Qilin, and taken to a secret realm called Po Nian Space. The secret realm contained the ruins of an ancient heaven. Dark Qilin told him that he had to pass through if he wanted to go back. The test of heaven, and this test is to rebuild heaven...

Conan was the only child born on Remnant Island, a place settled by a group of refugees while they fled a terrifying wave of magnetic bombs that wiped out most of humanity. After 20 years, most of the castaways have died, save for Conan and the wise old man that raised him. Believing Remnant Island to be the last inhabited place on Earth, Conan is shocked when he discovers a young girl named Lana washed up on the beach one day. Though he is thrilled to learn that humanity has survived, Lana tells him the nation of Industria wants her as a hostage to force her grandfather, Dr. Lao, to power their machinery. Their conversation is cut short when Industria's top pilot, Monsley, suddenly appears and seizes Lana. Determined to save her, Conan immediately sets off from Remnant Island and begins a journey that will ultimately determine the fate of the world.

Kouichi Uehara is a fourth grade student living in the suburb of Tokyo. One day, he picks up a large stone which turns out to be a fossil of a baby "Kappa" who has been sleeping underground for the past 300 years, and names it "Coo." They become good friends and Coo starts living with Kouichi's family. However, Coo has a hard time adjusting to life among humans and misses his kind.

Kiki, a 13-year-old witch-in-training, must spend a year living on her own in a distant town in order to become a full-fledged witch. Leaving her family and friends, Kiki undertakes this tradition when she flies out into the open world atop her broomstick with her black cat Jiji.

As she settles down in the coastal town of Koriko, Kiki struggles to adapt and ends up wandering the streets with no place to stay—until she encounters Osono, who offers Kiki boarding in exchange for making deliveries for her small bakery. Before long, Kiki decides to open her own courier service by broomstick, beginning her journey to independence. In attempting to find her place among the townsfolk, Kiki brings with her exciting new experiences and comes to understand the true meaning of responsibility.